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Showing 25 of 1,516 matching publications
An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database
Jimmy K. Eng, Ashley L. McCormack, John R. Yates · Journal of the American Society for Mass Spectrometry
Large-scale analysis of the yeast proteome by multidimensional protein identification technology
Michael P. Washburn, Dirk Wolters, John R. Yates · Nature Biotechnology
Microglia Promote Learning-Dependent Synapse Formation through Brain-Derived Neurotrophic Factor
Christopher N. Parkhurst, Guang Yang, Ipe Ninan, Jeffrey N. Savas, John R. Yates, …, Wen-Biao Gan · Cell
A Model for Random Sampling and Estimation of Relative Protein Abundance in Shotgun Proteomics
Hongbin Liu, Rovshan G. Sadygov, John R. Yates · Analytical Chemistry
Wnt proteins are lipid-modified and can act as stem cell growth factors
Karl Willert, Jeffrey D. Brown, Esther Danenberg, Andrew W. Duncan, Irving L. Weissman, …, Roel Nusse · Nature
Direct analysis of protein complexes using mass spectrometry
Andrew J. Link, Jimmy Eng, David M. Schieltz, Edwin Carmack, Gregory J. Mize, …, John R. Yates · Nature Biotechnology
An Automated Multidimensional Protein Identification Technology for Shotgun Proteomics
Dirk A. Wolters, Michael P. Washburn, John R. Yates · Analytical Chemistry
Protein Analysis by Shotgun/Bottom-up Proteomics
Yaoyang Zhang, Bryan R. Fonslow, Bing Shan, Moon-Chang Baek, John R. Yates · Chemical Reviews
DTASelect and Contrast: Tools for Assembling and Comparing Protein Identifications from Shotgun Proteomics
David L. Tabb, W. Hayes McDonald, John R. Yates · Journal of Proteome Research
Histone H3 Methylation by Set2 Directs Deacetylation of Coding Regions by Rpd3S to Suppress Spurious Intragenic Transcription
Michael J. Carrozza, Bing Li, Laurence Florens, Tamaki Suganuma, Selene K. Swanson, …, Jerry L. Workman · Cell
A proteomic view of the Plasmodium falciparum life cycle
Laurence Florens, Michael P. Washburn, J. Dale Raine, Robert M. Anthony, Munira Grainger, …, Daniel J. Carucci · Nature
Method to Correlate Tandem Mass Spectra of Modified Peptides to Amino Acid Sequences in the Protein Database
John R. Yates, Jimmy K. Eng, Ashley L. McCormack, David. Schieltz · Analytical Chemistry
The hMre11/hRad50 Protein Complex and Nijmegen Breakage Syndrome: Linkage of Double-Strand Break Repair to the Cellular DNA Damage Response
James P Carney, Richard S Maser, Heidi Olivares, Elizabeth M Davis, Michelle Le Beau, …, John H.J Petrini · Cell
Protein sequencing by tandem mass spectrometry.
D F Hunt, J R Yates, J Shabanowitz, S Winston, C R Hauer · Proceedings of the National Academy of Sciences
Proteomics by Mass Spectrometry: Approaches, Advances, and Applications
John R. Yates, Cristian I. Ruse, Aleksey Nakorchevsky · Annual Review of Biomedical Engineering
Role of Rpn11 Metalloprotease in Deubiquitination and Degradation by the 26 <i>S</i> Proteasome
Rati Verma, L. Aravind, Robert Oania, W. Hayes McDonald, John R. Yates, …, Raymond J. Deshaies · Science
Assembly and aggregation properties of synthetic Alzheimer's A4/beta amyloid peptide analogs.
D Burdick, B Soreghan, M Kwon, J Kosmoski, M Knauer, …, C Glabe · Journal of Biological Chemistry
Automated approach for quantitative analysis of complex peptide mixtures from tandem mass spectra
John D Venable, Meng-Qiu Dong, James Wohlschlegel, Andrew Dillin, John R Yates · Nature Methods
A Comprehensive Survey of the <i>Plasmodium</i> Life Cycle by Genomic, Transcriptomic, and Proteomic Analyses
Neil Hall, Marianna Karras, J. Dale Raine, Jane M. Carlton, Taco W. A. Kooij, …, Robert E. Sinden · Science
The minimum information about a proteomics experiment (MIAPE)
Chris F Taylor, Norman W Paton, Kathryn S Lilley, Pierre-Alain Binz, Randall K Julian, …, Henning Hermjakob · Nature Biotechnology
The human CENP-A centromeric nucleosome-associated complex
Daniel R. Foltz, Lars E. T. Jansen, Ben E. Black, Aaron O. Bailey, John R. Yates, Don W. Cleveland · Nature Cell Biology
Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii
Jane M. Carlton, Samuel V. Angiuoli, Bernard B. Suh, Taco W. Kooij, Mihaela Pertea, …, Daniel J. Carucci · Nature
Mass spectrometry for proteomics
Xuemei Han, Aaron Aslanian, John R Yates · Current Opinion in Chemical Biology
Mass spectrometry and the age of the proteome
John R. Yates · Journal of Mass Spectrometry
The insulin-like growth factor (IGF)-dependent IGF binding protein-4 protease secreted by human fibroblasts is pregnancy-associated plasma protein-A
James B. Lawrence, Claus Oxvig, Michael T. Overgaard, Lars Sottrup-Jensen, Gerald J. Gleich, …, Cheryl A. Conover · Proceedings of the National Academy of Sciences